STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSMCE2NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (240 aa)    
Predicted Functional Partners:
SMC5
Structural maintenance of chromosomes 5.
    
 0.999
NSMCE1
NSE1 homolog, SMC5-SMC6 complex component.
    
 0.999
SMC6
Structural maintenance of chromosomes 6.
    
 0.999
NSMCE4A
NSE4 homolog A, SMC5-SMC6 complex component.
    
 0.997
MAGED2
MAGE family member D2.
    
 0.975
ENSPCAP00000007676
annotation not available
    
 0.967
ENSPCAP00000009238
annotation not available
    
 0.967
UBE2I
Ubiquitin conjugating enzyme E2 I.
   
 0.937
KCTD2
Potassium channel tetramerization domain containing 2.
   
 0.937
SMC3
Structural maintenance of chromosomes 3.
    
 0.929
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.