Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPED1Cadherin like and PC-esterase domain containing 1. (911 aa)    
Predicted Functional Partners:
ENSPCAP00000010348
annotation not available
      
 0.666
ING3
Inhibitor of growth family member 3.
      
 0.568
ENSPCAP00000010097
annotation not available
      
 0.561
EPDR1
Ependymin related 1.
      
 0.513
TTC7A
Tetratricopeptide repeat domain 7A.
      
 0.507
WNT16
Wnt family member 16.
      
 0.488
NELFCD
Negative elongation factor complex member C/D.
      
 0.484
MAMSTR
MEF2 activating motif and SAP domain containing transcriptional regulator.
      
 0.476
UPB1
Beta-ureidopropionase 1.
      
 0.462
CPSF3
Cleavage and polyadenylation specific factor 3.
      
 0.462
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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