STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPAP3RNA polymerase II associated protein 3. (665 aa)    
Predicted Functional Partners:
RUVBL1
RuvB like AAA ATPase 1.
    
 0.988
PIH1D1
PIH1 domain containing 1.
   
 
 0.969
RUVBL2
RuvB like AAA ATPase 2.
    
 
 0.965
WDR92
WD repeat domain 92.
   
 0.948
ENSPCAP00000002859
annotation not available
  
 0.942
ENSPCAP00000007162
annotation not available
   
 0.919
POLR2E
RNA polymerase II subunit E.
    
 0.904
ACTR5
Actin related protein 5.
   
 0.896
UXT
Ubiquitously expressed prefoldin like chaperone.
    
 
 0.878
ENSPCAP00000004384
annotation not available
    
 0.876
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.