STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC2Zinc finger DHHC-type palmitoyltransferase 2. (323 aa)    
Predicted Functional Partners:
CKAP4
Cytoskeleton associated protein 4.
     
 0.921
SKA1
Spindle and kinetochore associated complex subunit 1.
   
 0.696
ENSPCAP00000015123
annotation not available
    
 0.691
WRN
WRN RecQ like helicase.
    
 
 0.670
PPT1
Palmitoyl-protein thioesterase 1.
   
  
 0.610
RSPRY1
Ring finger and SPRY domain containing 1.
    
 
 0.604
GTF3C1
General transcription factor IIIC subunit 1.
      
 0.579
NRIP3
Nuclear receptor interacting protein 3.
      
 0.575
SPC25
SPC25 component of NDC80 kinetochore complex.
   
 0.575
RCBTB1
RCC1 and BTB domain containing protein 1.
    
 
 0.572
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.