STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF121Ring finger protein 121. (325 aa)    
Predicted Functional Partners:
RNF5
Ring finger protein 5.
 
    
 0.600
CFAP161
Cilia and flagella associated protein 161.
      
 0.581
MOSPD2
Motile sperm domain containing 2.
      
 0.579
ZGLP1
Zinc finger GATA like protein 1.
      
 0.577
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
   
  
 0.564
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
      
 0.563
SLC45A1
Solute carrier family 45 member 1.
      
 0.562
MORN1
MORN repeat containing 1.
      
 0.561
MARCHF6
Membrane associated ring-CH-type finger 6.
      
 0.519
NOL3
Nucleolar protein 3.
      
 0.519
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.