CSNK1G2 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CSNK1G2

Casein kinase 1 gamma 2. (414 aa)

Predicted Functional Partners:

SMO

0.866

PRKACA

0.857

PRKACB

0.857

GRK2

0.841

GRK3

0.841

CERT1

0.767

CSNK1D

0.547

ENSPCAP00000012770

0.546

ENSPCAP00000011295

0.539

ENSPCAP00000014334

0.539

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CERT1	CSNK1G2	ENSPCAP00000000019	ENSPCAP00000001978	Ceramide transporter 1.	Casein kinase 1 gamma 2.	0.767
CSNK1D	CSNK1G2	ENSPCAP00000001175	ENSPCAP00000001978	Casein kinase 1 delta.	Casein kinase 1 gamma 2.	0.547
CSNK1D	ENSPCAP00000011295	ENSPCAP00000001175	ENSPCAP00000011295	Casein kinase 1 delta.	annotation not available	0.818
CSNK1D	ENSPCAP00000012770	ENSPCAP00000001175	ENSPCAP00000012770	Casein kinase 1 delta.	annotation not available	0.893
CSNK1D	ENSPCAP00000014334	ENSPCAP00000001175	ENSPCAP00000014334	Casein kinase 1 delta.	annotation not available	0.820
CSNK1D	PRKACA	ENSPCAP00000001175	ENSPCAP00000001493	Casein kinase 1 delta.	Protein kinase cAMP-activated catalytic subunit alpha.	0.902
CSNK1D	PRKACB	ENSPCAP00000001175	ENSPCAP00000014458	Casein kinase 1 delta.	Protein kinase cAMP-activated catalytic subunit beta.	0.902
CSNK1D	SMO	ENSPCAP00000001175	ENSPCAP00000011149	Casein kinase 1 delta.	Smoothened, frizzled class receptor.	0.904
CSNK1G2	CERT1	ENSPCAP00000001978	ENSPCAP00000000019	Casein kinase 1 gamma 2.	Ceramide transporter 1.	0.767
CSNK1G2	CSNK1D	ENSPCAP00000001978	ENSPCAP00000001175	Casein kinase 1 gamma 2.	Casein kinase 1 delta.	0.547
CSNK1G2	ENSPCAP00000011295	ENSPCAP00000001978	ENSPCAP00000011295	Casein kinase 1 gamma 2.	annotation not available	0.539
CSNK1G2	ENSPCAP00000012770	ENSPCAP00000001978	ENSPCAP00000012770	Casein kinase 1 gamma 2.	annotation not available	0.546
CSNK1G2	ENSPCAP00000014334	ENSPCAP00000001978	ENSPCAP00000014334	Casein kinase 1 gamma 2.	annotation not available	0.539
CSNK1G2	GRK2	ENSPCAP00000001978	ENSPCAP00000010659	Casein kinase 1 gamma 2.	G protein-coupled receptor kinase 2.	0.841
CSNK1G2	GRK3	ENSPCAP00000001978	ENSPCAP00000011960	Casein kinase 1 gamma 2.	G protein-coupled receptor kinase 3.	0.841
CSNK1G2	PRKACA	ENSPCAP00000001978	ENSPCAP00000001493	Casein kinase 1 gamma 2.	Protein kinase cAMP-activated catalytic subunit alpha.	0.857
CSNK1G2	PRKACB	ENSPCAP00000001978	ENSPCAP00000014458	Casein kinase 1 gamma 2.	Protein kinase cAMP-activated catalytic subunit beta.	0.857
CSNK1G2	SMO	ENSPCAP00000001978	ENSPCAP00000011149	Casein kinase 1 gamma 2.	Smoothened, frizzled class receptor.	0.866
ENSPCAP00000011295	CSNK1D	ENSPCAP00000011295	ENSPCAP00000001175	annotation not available	Casein kinase 1 delta.	0.818
ENSPCAP00000011295	CSNK1G2	ENSPCAP00000011295	ENSPCAP00000001978	annotation not available	Casein kinase 1 gamma 2.	0.539