STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLIM1Actin binding LIM protein 1. (764 aa)    
Predicted Functional Partners:
ABLIM2
Actin binding LIM protein family member 2.
    
  0.911
DLG4
Discs large MAGUK scaffold protein 4.
    
 
 0.907
ENSPCAP00000010648
annotation not available
     
 0.872
SYNGAP1
Synaptic Ras GTPase activating protein 1.
    
   0.864
ABLIM3
Actin binding LIM protein family member 3.
     
  0.863
RAC1
Rac family small GTPase 1.
     
 0.849
ENSPCAP00000002179
annotation not available
     
 0.849
RAC3
Rac family small GTPase 3.
     
 0.849
ANLN
Anillin actin binding protein.
    
   0.810
LIN7C
Lin-7 homolog C, crumbs cell polarity complex component.
    
   0.800
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.