STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C6General transcription factor IIIC subunit 6. (213 aa)    
Predicted Functional Partners:
GTF3C4
General transcription factor IIIC subunit 4.
     
  0.925
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
     
  0.925
GTF3C3
General transcription factor IIIC subunit 3.
     
  0.924
GTF3C2
General transcription factor IIIC subunit 2.
     
  0.923
GTF3C1
General transcription factor IIIC subunit 1.
     
  0.923
ENSPCAP00000009653
annotation not available
     
  0.923
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
     
  0.907
ZNF512B
Zinc finger protein 512B.
     
  0.572
ZNF512
Zinc finger protein 512.
     
  0.572
ENSPCAP00000001822
annotation not available
     
  0.514
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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