STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF516Zinc finger protein 516. (1121 aa)    
Predicted Functional Partners:
KDM1A
Lysine demethylase 1A.
    
 0.988
ENSPCAP00000001774
annotation not available
    
 0.968
PRDM16
PR/SET domain 16.
    
 0.968
RCOR1
REST corepressor 1.
    
 0.947
CTBP2
C-terminal binding protein 2.
    
 
 0.894
CTBP1
C-terminal binding protein 1.
    
 
 0.894
SLC35F1
Solute carrier family 35 member F1.
      
 0.855
HDAC1
Histone deacetylase 1.
    
 0.825
HDAC2
Histone deacetylase 2.
    
 0.825
ENSPCAP00000011104
annotation not available
    
  0.815
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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