Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001995annotation not available (227 aa)    
Predicted Functional Partners:
ENSPCAP00000003329
annotation not available
      
 0.682
MST1R
Macrophage stimulating 1 receptor.
   
  0.595
MET
MET proto-oncogene, receptor tyrosine kinase.
   
  0.587
TSPAN2
Tetraspanin 2.
      
 0.569
TRPC4
Transient receptor potential cation channel subfamily C member 4.
      
 0.564
TRPC5
Transient receptor potential cation channel subfamily C member 5.
      
 0.563
ADAM10
ADAM metallopeptidase domain 10.
    
 0.475
SEC62
SEC62 homolog, preprotein translocation factor.
      
 0.469
PCDH1
Protocadherin 1.
     
 0.465
ENSPCAP00000002077
annotation not available
      
 0.464
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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