STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3DRAB3D, member RAS oncogene family. (219 aa)    
Predicted Functional Partners:
ENSPCAP00000007837
annotation not available
    
 0.995
RAB11A
RAB11A, member RAS oncogene family.
  
 
0.902
RAB8A
RAB8A, member RAS oncogene family.
  
 
0.818
RAB8B
RAB8B, member RAS oncogene family.
  
 
0.817
SYT1
Synaptotagmin 1.
   
 0.761
SYT2
Synaptotagmin 2.
   
 0.761
SNAP25
Synaptosome associated protein 25.
   
 0.757
RAB11B
RAB11B, member RAS oncogene family.
  
 
0.757
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.750
CHM
CHM Rab escort protein.
    
 0.744
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.