ENSPCAP00000002016 protein (Procavia capensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

ENSPCAP00000002016

annotation not available (126 aa)

Predicted Functional Partners:

MRPL41

0.993

MRPL13

0.992

MRPL47

0.992

MRPL52

0.984

MRPL11

0.984

MRPL12

0.981

MRPL4

0.980

MRPS14

0.979

ENSPCAP00000007170

0.978

MRPL50

0.974

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000002016	ENSPCAP00000007170	ENSPCAP00000002016	ENSPCAP00000007170	annotation not available	annotation not available	0.978
ENSPCAP00000002016	MRPL11	ENSPCAP00000002016	ENSPCAP00000007796	annotation not available	Mitochondrial ribosomal protein L11.	0.984
ENSPCAP00000002016	MRPL12	ENSPCAP00000002016	ENSPCAP00000014130	annotation not available	Mitochondrial ribosomal protein L12.	0.981
ENSPCAP00000002016	MRPL13	ENSPCAP00000002016	ENSPCAP00000001424	annotation not available	Mitochondrial ribosomal protein L13.	0.992
ENSPCAP00000002016	MRPL4	ENSPCAP00000002016	ENSPCAP00000002233	annotation not available	Mitochondrial ribosomal protein L4.	0.980
ENSPCAP00000002016	MRPL41	ENSPCAP00000002016	ENSPCAP00000002534	annotation not available	Mitochondrial ribosomal protein L41.	0.993
ENSPCAP00000002016	MRPL47	ENSPCAP00000002016	ENSPCAP00000015433	annotation not available	Mitochondrial ribosomal protein L47.	0.992
ENSPCAP00000002016	MRPL50	ENSPCAP00000002016	ENSPCAP00000006312	annotation not available	Mitochondrial ribosomal protein L50.	0.974
ENSPCAP00000002016	MRPL52	ENSPCAP00000002016	ENSPCAP00000000658	annotation not available	Mitochondrial ribosomal protein L52.	0.984
ENSPCAP00000002016	MRPS14	ENSPCAP00000002016	ENSPCAP00000003499	annotation not available	Mitochondrial ribosomal protein S14.	0.979
ENSPCAP00000007170	ENSPCAP00000002016	ENSPCAP00000007170	ENSPCAP00000002016	annotation not available	annotation not available	0.978
ENSPCAP00000007170	MRPL11	ENSPCAP00000007170	ENSPCAP00000007796	annotation not available	Mitochondrial ribosomal protein L11.	0.975
ENSPCAP00000007170	MRPL12	ENSPCAP00000007170	ENSPCAP00000014130	annotation not available	Mitochondrial ribosomal protein L12.	0.980
ENSPCAP00000007170	MRPL13	ENSPCAP00000007170	ENSPCAP00000001424	annotation not available	Mitochondrial ribosomal protein L13.	0.968
ENSPCAP00000007170	MRPL4	ENSPCAP00000007170	ENSPCAP00000002233	annotation not available	Mitochondrial ribosomal protein L4.	0.966
ENSPCAP00000007170	MRPL41	ENSPCAP00000007170	ENSPCAP00000002534	annotation not available	Mitochondrial ribosomal protein L41.	0.968
ENSPCAP00000007170	MRPL47	ENSPCAP00000007170	ENSPCAP00000015433	annotation not available	Mitochondrial ribosomal protein L47.	0.965
ENSPCAP00000007170	MRPL50	ENSPCAP00000007170	ENSPCAP00000006312	annotation not available	Mitochondrial ribosomal protein L50.	0.965
ENSPCAP00000007170	MRPL52	ENSPCAP00000007170	ENSPCAP00000000658	annotation not available	Mitochondrial ribosomal protein L52.	0.954
ENSPCAP00000007170	MRPS14	ENSPCAP00000007170	ENSPCAP00000003499	annotation not available	Mitochondrial ribosomal protein S14.	0.760