STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000002023annotation not available (337 aa)    
Predicted Functional Partners:
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 0.999
VARS1
valyl-tRNA synthetase 1.
   
 0.984
ENSPCAP00000014229
annotation not available
   
 0.980
ENSPCAP00000012460
annotation not available
  
 0.974
MARS1
methionyl-tRNA synthetase 1.
   
 0.973
EEF1D
Eukaryotic translation elongation factor 1 delta.
   
 0.969
ETF1
Eukaryotic translation termination factor 1.
   
 0.969
ENSPCAP00000001939
annotation not available
   
 0.967
RPS3
Ribosomal protein S3.
   
 0.963
RPS3A
Ribosomal protein S3A.
  
 0.961
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.