STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM200ATransmembrane protein 200A. (491 aa)    
Predicted Functional Partners:
VMO1
Vitelline membrane outer layer 1 homolog.
      
 0.525
BACE2
Beta-secretase 2.
      
 0.522
ENSPCAP00000000791
annotation not available
      
 0.508
TOR1A
Torsin family 1 member A.
      
 0.465
CNOT2
CCR4-NOT transcription complex subunit 2.
      
 0.426
FAM189A2
Family with sequence similarity 189 member A2.
      
 0.422
TC2N
Tandem C2 domains, nuclear.
      
 0.420
VIP
Vasoactive intestinal peptide.
  
   
 0.412
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.