Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000002074annotation not available (167 aa)    
Predicted Functional Partners:
ENSPCAP00000001997
annotation not available
  
 
 0.900
MRPL16
Mitochondrial ribosomal protein L16.
  
 
 0.897
ENSPCAP00000001447
annotation not available
    
 
 0.885
MRPL20
Mitochondrial ribosomal protein L20.
  
 
 0.883
MRPL19
Mitochondrial ribosomal protein L19.
  
   0.874
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
    
 
 0.872
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.870
DARS2
aspartyl-tRNA synthetase 2, mitochondrial.
  
  
 0.870
MRPS22
Mitochondrial ribosomal protein S22.
    
 
 0.867
PTCD3
Pentatricopeptide repeat domain 3.
    
 
 0.846
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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