STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID4AAT-rich interaction domain 4A. (1248 aa)    
Predicted Functional Partners:
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.997
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.997
WDR73
WD repeat domain 73.
   
 0.997
BRMS1L
BRMS1 like transcriptional repressor.
    
 0.993
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.993
SAP30
Sin3A associated protein 30.
    
 0.993
ENSPCAP00000014817
annotation not available
    
 0.993
ENSPCAP00000012058
annotation not available
    
 0.992
SAP18
Sin3A associated protein 18.
   
 
 0.983
HDAC1
Histone deacetylase 1.
    
 0.980
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.