STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000002091annotation not available (895 aa)    
Predicted Functional Partners:
ATG13
Autophagy related 13.
    
 0.987
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.979
ENSPCAP00000007347
annotation not available
   
   0.955
ATG2A
Autophagy related 2A.
   
 0.952
ENSPCAP00000010105
annotation not available
   
 0.950
ATG2B
Autophagy related 2B.
   
 0.947
WIPI2
WD repeat domain, phosphoinositide interacting 2.
   
 0.946
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 0.945
TBC1D5
TBC1 domain family member 5.
    
 
 0.935
RUSC2
RUN and SH3 domain containing 2.
   
 
 0.929
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.