STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTC4SLeukotriene C4 synthase. (150 aa)    
Predicted Functional Partners:
LTA4H
Leukotriene A4 hydrolase.
     
 0.941
ALOX5
Arachidonate 5-lipoxygenase.
    
 0.936
GGT5
Gamma-glutamyltransferase 5.
     
 0.892
ENSPCAP00000008460
annotation not available
     
 0.886
MGST1
Microsomal glutathione S-transferase 1.
    
 0.827
PTGES
Prostaglandin E synthase.
    
 0.809
ALOX12
Arachidonate 12-lipoxygenase, 12S type.
    
 0.791
ALOX5AP
Arachidonate 5-lipoxygenase activating protein.
   
0.744
EPHX1
Epoxide hydrolase 1.
   
 
 0.732
ALOX15B
Arachidonate 15-lipoxygenase type B.
    
 0.727
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.