Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKZF1Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1. (720 aa)    
Predicted Functional Partners:
ENSPCAP00000015803
annotation not available
   
 0.952
VCP
Valosin containing protein.
   
 0.928
FAAP100
FA core complex associated protein 100.
    
 0.905
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.895
ENSPCAP00000013714
annotation not available
   
 0.895
ERMN
Ermin.
   
 0.824
LTN1
Listerin E3 ubiquitin protein ligase 1.
    
 0.812
EIF6
Eukaryotic translation initiation factor 6.
    
   0.772
TOMM7
Translocase of outer mitochondrial membrane 7.
    
  0.713
TCF25
Transcription factor 25.
   
 0.712
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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