close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKZF1Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1. (720 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 
 0.902
EIF6
Eukaryotic translation initiation factor 6.
    
   0.867
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 
 0.865
ENSPCAP00000013714
annotation not available
   
 
 0.865
ENSPCAP00000015803
annotation not available
   
 
 0.722
ATAD1
ATPase family AAA domain containing 1.
    
 
 0.674
RPLP0
Ribosomal protein lateral stalk subunit P0.
    
 
 0.674
ENSPCAP00000007370
annotation not available
    
 
 0.672
RPL30
Ribosomal protein L30.
    
   0.664
ENSPCAP00000007529
annotation not available
    
   0.664
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.