Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA5BSemaphorin 5B. (1026 aa)    
Predicted Functional Partners:
ENSPCAP00000002787
annotation not available
      
 0.911
PLXNB1
Plexin B1.
    
 0.855
PLXNB3
Plexin B3.
    
 0.855
ENSPCAP00000002632
annotation not available
 
  
  0.839
PLXNB2
Plexin B2.
    
 0.792
NRP1
Neuropilin 1.
    
 0.775
PLXNC1
Plexin C1.
    
 0.707
SDK2
Sidekick cell adhesion molecule 2.
    
 
 0.703
ADAR
Adenosine deaminase RNA specific.
      
 0.692
TOR1A
Torsin family 1 member A.
      
 0.675
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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