STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA5BSemaphorin 5B. (1026 aa)    
Predicted Functional Partners:
PLXNB1
Plexin B1.
    
 0.845
PLXNB3
Plexin B3.
    
 0.845
ENSPCAP00000002632
annotation not available
 
  
  0.833
PLXNB2
Plexin B2.
    
 0.815
NRP1
Neuropilin 1.
    
 0.798
MST1R
Macrophage stimulating 1 receptor.
    
 0.767
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.767
PLXNC1
Plexin C1.
    
 0.733
PLXND1
Plexin D1.
    
 0.712
PLXNA3
Plexin A3.
    
 0.711
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.