MSI1 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

MSI1

Musashi RNA binding protein 1. (273 aa)

Predicted Functional Partners:

ENSPCAP00000007547

0.890

DAZAP1

0.877

MSI2

0.841

CPSF4

0.837

CSTF2T

0.835

ENSPCAP00000008797

0.812

ZC3H6

0.752

NOVA1

0.714

WDR82

0.704

ZC3H4

0.684

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPSF4	CSTF2T	ENSPCAP00000001771	ENSPCAP00000000038	Cleavage and polyadenylation specific factor 4.	Cleavage stimulation factor subunit 2 tau variant.	0.996
CPSF4	DAZAP1	ENSPCAP00000001771	ENSPCAP00000006099	Cleavage and polyadenylation specific factor 4.	DAZ associated protein 1.	0.837
CPSF4	ENSPCAP00000007547	ENSPCAP00000001771	ENSPCAP00000007547	Cleavage and polyadenylation specific factor 4.	annotation not available	0.989
CPSF4	ENSPCAP00000008797	ENSPCAP00000001771	ENSPCAP00000008797	Cleavage and polyadenylation specific factor 4.	annotation not available	0.654
CPSF4	MSI1	ENSPCAP00000001771	ENSPCAP00000002146	Cleavage and polyadenylation specific factor 4.	Musashi RNA binding protein 1.	0.837
CPSF4	MSI2	ENSPCAP00000001771	ENSPCAP00000009813	Cleavage and polyadenylation specific factor 4.	Musashi RNA binding protein 2.	0.837
CPSF4	WDR82	ENSPCAP00000001771	ENSPCAP00000014635	Cleavage and polyadenylation specific factor 4.	WD repeat domain 82.	0.991
CSTF2T	CPSF4	ENSPCAP00000000038	ENSPCAP00000001771	Cleavage stimulation factor subunit 2 tau variant.	Cleavage and polyadenylation specific factor 4.	0.996
CSTF2T	DAZAP1	ENSPCAP00000000038	ENSPCAP00000006099	Cleavage stimulation factor subunit 2 tau variant.	DAZ associated protein 1.	0.792
CSTF2T	ENSPCAP00000007547	ENSPCAP00000000038	ENSPCAP00000007547	Cleavage stimulation factor subunit 2 tau variant.	annotation not available	0.997
CSTF2T	ENSPCAP00000008797	ENSPCAP00000000038	ENSPCAP00000008797	Cleavage stimulation factor subunit 2 tau variant.	annotation not available	0.557
CSTF2T	MSI1	ENSPCAP00000000038	ENSPCAP00000002146	Cleavage stimulation factor subunit 2 tau variant.	Musashi RNA binding protein 1.	0.835
CSTF2T	MSI2	ENSPCAP00000000038	ENSPCAP00000009813	Cleavage stimulation factor subunit 2 tau variant.	Musashi RNA binding protein 2.	0.792
CSTF2T	WDR82	ENSPCAP00000000038	ENSPCAP00000014635	Cleavage stimulation factor subunit 2 tau variant.	WD repeat domain 82.	0.978
CSTF2T	ZC3H4	ENSPCAP00000000038	ENSPCAP00000013951	Cleavage stimulation factor subunit 2 tau variant.	Zinc finger CCCH-type containing 4.	0.870
CSTF2T	ZC3H6	ENSPCAP00000000038	ENSPCAP00000014470	Cleavage stimulation factor subunit 2 tau variant.	Zinc finger CCCH-type containing 6.	0.870
DAZAP1	CPSF4	ENSPCAP00000006099	ENSPCAP00000001771	DAZ associated protein 1.	Cleavage and polyadenylation specific factor 4.	0.837
DAZAP1	CSTF2T	ENSPCAP00000006099	ENSPCAP00000000038	DAZ associated protein 1.	Cleavage stimulation factor subunit 2 tau variant.	0.792
DAZAP1	ENSPCAP00000007547	ENSPCAP00000006099	ENSPCAP00000007547	DAZ associated protein 1.	annotation not available	0.890
DAZAP1	ENSPCAP00000008797	ENSPCAP00000006099	ENSPCAP00000008797	DAZ associated protein 1.	annotation not available	0.812