Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRKCDProtein kinase C delta. (675 aa)    
Predicted Functional Partners:
ELAVL1
ELAV like RNA binding protein 1.
    
 0.993
CARD11
Caspase recruitment domain family member 11.
   
 0.980
PRKCB
Protein kinase C beta.
    
  0.974
PRKCA
Protein kinase C alpha.
    
  0.974
STAT1
Signal transducer and activator of transcription 1.
    
 0.972
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.969
NCF1
Neutrophil cytosolic factor 1.
   
 0.965
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
  0.952
ENSPCAP00000009332
annotation not available
    
 0.930
SRC
SRC proto-oncogene, non-receptor tyrosine kinase.
   
 0.926
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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