STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERMARDER membrane associated RNA degradation. (673 aa)    
Predicted Functional Partners:
CCT7
Chaperonin containing TCP1 subunit 7.
   
 0.992
CCT4
Chaperonin containing TCP1 subunit 4.
   
 0.991
ENSPCAP00000010118
annotation not available
   
 0.991
CCT2
Chaperonin containing TCP1 subunit 2.
   
 0.991
CCT8
Chaperonin containing TCP1 subunit 8.
   
 0.991
TCP1
T-complex 1.
   
 0.989
BBS10
Bardet-Biedl syndrome 10.
   
 0.967
MKKS
McKusick-Kaufman syndrome.
   
 0.960
CCT6B
Chaperonin containing TCP1 subunit 6B.
   
 0.957
CCT6A
Chaperonin containing TCP1 subunit 6A.
   
 0.957
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.