PTBP3 protein (Procavia capensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

PTBP3

Polypyrimidine tract binding protein 3. (541 aa)

Predicted Functional Partners:

HNRNPL

0.959

HNRNPK

0.957

ENSPCAP00000004535

0.941

ENSPCAP00000001760

0.930

ENSPCAP00000002549

0.921

ELAVL1

0.890

HNRNPD

0.875

HNRNPAB

0.875

HNRNPLL

0.863

ENSPCAP00000007299

0.862

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ELAVL1	ENSPCAP00000001760	ENSPCAP00000014954	ENSPCAP00000001760	ELAV like RNA binding protein 1.	annotation not available	0.907
ELAVL1	ENSPCAP00000004535	ENSPCAP00000014954	ENSPCAP00000004535	ELAV like RNA binding protein 1.	annotation not available	0.988
ELAVL1	ENSPCAP00000007299	ENSPCAP00000014954	ENSPCAP00000007299	ELAV like RNA binding protein 1.	annotation not available	0.481
ELAVL1	HNRNPAB	ENSPCAP00000014954	ENSPCAP00000006285	ELAV like RNA binding protein 1.	Heterogeneous nuclear ribonucleoprotein A/B.	0.874
ELAVL1	HNRNPD	ENSPCAP00000014954	ENSPCAP00000002043	ELAV like RNA binding protein 1.	Heterogeneous nuclear ribonucleoprotein D.	0.851
ELAVL1	HNRNPK	ENSPCAP00000014954	ENSPCAP00000015170	ELAV like RNA binding protein 1.	Heterogeneous nuclear ribonucleoprotein K.	0.989
ELAVL1	HNRNPL	ENSPCAP00000014954	ENSPCAP00000006240	ELAV like RNA binding protein 1.	Heterogeneous nuclear ribonucleoprotein L.	0.866
ELAVL1	HNRNPLL	ENSPCAP00000014954	ENSPCAP00000009297	ELAV like RNA binding protein 1.	Heterogeneous nuclear ribonucleoprotein L like.	0.556
ELAVL1	PTBP3	ENSPCAP00000014954	ENSPCAP00000002157	ELAV like RNA binding protein 1.	Polypyrimidine tract binding protein 3.	0.890
ENSPCAP00000001760	ELAVL1	ENSPCAP00000001760	ENSPCAP00000014954	annotation not available	ELAV like RNA binding protein 1.	0.907
ENSPCAP00000001760	ENSPCAP00000002549	ENSPCAP00000001760	ENSPCAP00000002549	annotation not available	annotation not available	0.585
ENSPCAP00000001760	ENSPCAP00000004535	ENSPCAP00000001760	ENSPCAP00000004535	annotation not available	annotation not available	0.988
ENSPCAP00000001760	HNRNPAB	ENSPCAP00000001760	ENSPCAP00000006285	annotation not available	Heterogeneous nuclear ribonucleoprotein A/B.	0.887
ENSPCAP00000001760	HNRNPD	ENSPCAP00000001760	ENSPCAP00000002043	annotation not available	Heterogeneous nuclear ribonucleoprotein D.	0.887
ENSPCAP00000001760	HNRNPK	ENSPCAP00000001760	ENSPCAP00000015170	annotation not available	Heterogeneous nuclear ribonucleoprotein K.	0.993
ENSPCAP00000001760	HNRNPL	ENSPCAP00000001760	ENSPCAP00000006240	annotation not available	Heterogeneous nuclear ribonucleoprotein L.	0.955
ENSPCAP00000001760	HNRNPLL	ENSPCAP00000001760	ENSPCAP00000009297	annotation not available	Heterogeneous nuclear ribonucleoprotein L like.	0.856
ENSPCAP00000001760	PTBP3	ENSPCAP00000001760	ENSPCAP00000002157	annotation not available	Polypyrimidine tract binding protein 3.	0.930
ENSPCAP00000002549	ENSPCAP00000001760	ENSPCAP00000002549	ENSPCAP00000001760	annotation not available	annotation not available	0.585
ENSPCAP00000002549	ENSPCAP00000004535	ENSPCAP00000002549	ENSPCAP00000004535	annotation not available	annotation not available	0.429