STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMD2LIM domain containing 2. (128 aa)    
Predicted Functional Partners:
MED14
Mediator complex subunit 14.
      
 0.769
MRPL35
Mitochondrial ribosomal protein L35.
      
 0.571
MRPS11
Mitochondrial ribosomal protein S11.
      
 0.568
PDLIM2
PDZ and LIM domain 2.
     
 0.565
MPP7
Membrane palmitoylated protein 7.
      
 0.544
ENSPCAP00000008446
annotation not available
      
 0.515
STK3
Serine/threonine kinase 3.
    
  0.515
STK4
Serine/threonine kinase 4.
    
  0.515
TMEM160
Transmembrane protein 160.
      
 0.514
RNF182
Ring finger protein 182.
    
 
 0.508
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.