STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX49DEAD-box helicase 49. (479 aa)    
Predicted Functional Partners:
UTP3
UTP3 small subunit processome component.
   
 0.995
BYSL
Bystin like.
   
 0.992
WDR46
WD repeat domain 46.
   
 0.988
DHX37
DEAH-box helicase 37.
  
 0.985
DDX52
DExD-box helicase 52.
  
0.984
KRR1
KRR1 small subunit processome component homolog.
   
 0.984
UTP25
UTP25 small subunit processor component.
   
 0.979
ENSPCAP00000012336
annotation not available
   
 0.978
ENSPCAP00000005699
annotation not available
   
 0.976
ENSPCAP00000004442
annotation not available
   
 0.975
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.