STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000002185annotation not available (75 aa)    
Predicted Functional Partners:
CUL5
Cullin 5.
    
 0.690
OPTN
Optineurin.
    
 0.656
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.654
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.643
TNF
Tumor necrosis factor.
    
 0.623
CYLD
CYLD lysine 63 deubiquitinase.
    
 0.619
NFATC4
Nuclear factor of activated T cells 4.
    
 0.619
ENSPCAP00000014229
annotation not available
   
 0.614
UBC
Ubiquitin C.
   
 0.604
OASL
2'-5'-oligoadenylate synthetase like.
   
 0.604
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.