Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MEF2DMyocyte enhancer factor 2D. (521 aa)    
Predicted Functional Partners:
MEF2A
Myocyte enhancer factor 2A.
   
 0.996
MEF2B
Myocyte enhancer factor 2B.
    
 0.990
MEF2C
Myocyte enhancer factor 2C.
   
 0.989
CABIN1
Calcineurin binding protein 1.
    
 
 0.958
EP300
E1A binding protein p300.
   
 
 0.926
HDAC7
Histone deacetylase 7.
    
 
 0.925
NFATC2
Nuclear factor of activated T cells 2.
    
 0.918
NFATC1
Nuclear factor of activated T cells 1.
   
 0.894
NFATC4
Nuclear factor of activated T cells 4.
     
 0.875
NFATC3
Nuclear factor of activated T cells 3.
   
 0.875
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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