STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIFATRAF interacting protein with forkhead associated domain. (182 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor associated factor 6.
    
 0.995
ALPK1
Alpha kinase 1.
   
 0.970
ENSPCAP00000011509
annotation not available
    
 0.927
TRAF1
TNF receptor associated factor 1.
    
 0.927
UBC
Ubiquitin C.
    
  0.835
RIPPLY3
Ripply transcriptional repressor 3.
    
   0.802
ARHGEF39
Rho guanine nucleotide exchange factor 39.
    
   0.800
BIRC2
Baculoviral IAP repeat containing 2.
    
 
 0.763
ENSPCAP00000012521
annotation not available
    
 
 0.763
TAB3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
     
  0.732
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.