Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4Mitochondrial ribosomal protein L4. (236 aa)    
Predicted Functional Partners:
MRPL15
Mitochondrial ribosomal protein L15.
  
 0.996
MRPL3
Mitochondrial ribosomal protein L3.
  
 0.995
ENSPCAP00000008265
annotation not available
  
 0.995
MRPL24
Mitochondrial ribosomal protein L24.
  
 0.995
MRPL12
Mitochondrial ribosomal protein L12.
  
 0.995
ENSPCAP00000015292
annotation not available
  
 0.995
MRPL13
Mitochondrial ribosomal protein L13.
  
 0.994
MRPL22
Mitochondrial ribosomal protein L22.
  
 0.994
ENSPCAP00000014229
annotation not available
   
 0.993
ENSPCAP00000004187
annotation not available
  
 0.992
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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