ENSPCAP00000002250 protein (Procavia capensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSPCAP00000002250

annotation not available (413 aa)

Predicted Functional Partners:

ENSPCAP00000007126

0.685

ENSPCAP00000014868

0.639

TRIM28

0.638

MYSM1

0.534

ENSPCAP00000003739

0.519

NME8

0.508

KDM2B

0.503

FBXL19

0.503

KDM2A

0.503

GART

0.499

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000002250	ENSPCAP00000003739	ENSPCAP00000002250	ENSPCAP00000003739	annotation not available	annotation not available	0.519
ENSPCAP00000002250	ENSPCAP00000007126	ENSPCAP00000002250	ENSPCAP00000007126	annotation not available	annotation not available	0.685
ENSPCAP00000002250	ENSPCAP00000014868	ENSPCAP00000002250	ENSPCAP00000014868	annotation not available	annotation not available	0.639
ENSPCAP00000002250	FBXL19	ENSPCAP00000002250	ENSPCAP00000009715	annotation not available	F-box and leucine rich repeat protein 19.	0.503
ENSPCAP00000002250	GART	ENSPCAP00000002250	ENSPCAP00000009412	annotation not available	annotation not available	0.499
ENSPCAP00000002250	KDM2A	ENSPCAP00000002250	ENSPCAP00000010517	annotation not available	Lysine demethylase 2A.	0.503
ENSPCAP00000002250	KDM2B	ENSPCAP00000002250	ENSPCAP00000006985	annotation not available	Lysine demethylase 2B.	0.503
ENSPCAP00000002250	MYSM1	ENSPCAP00000002250	ENSPCAP00000012781	annotation not available	Myb like, SWIRM and MPN domains 1.	0.534
ENSPCAP00000002250	NME8	ENSPCAP00000002250	ENSPCAP00000014041	annotation not available	NME/NM23 family member 8.	0.508
ENSPCAP00000002250	TRIM28	ENSPCAP00000002250	ENSPCAP00000006707	annotation not available	Tripartite motif containing 28.	0.638
ENSPCAP00000003739	ENSPCAP00000002250	ENSPCAP00000003739	ENSPCAP00000002250	annotation not available	annotation not available	0.519
ENSPCAP00000003739	FBXL19	ENSPCAP00000003739	ENSPCAP00000009715	annotation not available	F-box and leucine rich repeat protein 19.	0.506
ENSPCAP00000003739	KDM2A	ENSPCAP00000003739	ENSPCAP00000010517	annotation not available	Lysine demethylase 2A.	0.526
ENSPCAP00000003739	KDM2B	ENSPCAP00000003739	ENSPCAP00000006985	annotation not available	Lysine demethylase 2B.	0.514
ENSPCAP00000003739	MYSM1	ENSPCAP00000003739	ENSPCAP00000012781	annotation not available	Myb like, SWIRM and MPN domains 1.	0.843
ENSPCAP00000003739	TRIM28	ENSPCAP00000003739	ENSPCAP00000006707	annotation not available	Tripartite motif containing 28.	0.423
ENSPCAP00000007126	ENSPCAP00000002250	ENSPCAP00000007126	ENSPCAP00000002250	annotation not available	annotation not available	0.685
ENSPCAP00000007126	FBXL19	ENSPCAP00000007126	ENSPCAP00000009715	annotation not available	F-box and leucine rich repeat protein 19.	0.512
ENSPCAP00000007126	GART	ENSPCAP00000007126	ENSPCAP00000009412	annotation not available	annotation not available	0.613
ENSPCAP00000007126	KDM2A	ENSPCAP00000007126	ENSPCAP00000010517	annotation not available	Lysine demethylase 2A.	0.512