Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000002255annotation not available (370 aa)    
Predicted Functional Partners:
ATG2B
Autophagy related 2B.
    
 0.987
ATG2A
Autophagy related 2A.
    
 0.984
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 0.909
WIPI2
WD repeat domain, phosphoinositide interacting 2.
   
 0.900
ATG16L2
Autophagy related 16 like 2.
     
 0.885
ATG16L1
Autophagy related 16 like 1.
     
 0.885
ENSPCAP00000007014
annotation not available
     
  0.841
ATG7
Autophagy related 7.
    
 
 0.618
BECN1
Beclin 1.
    
 
 0.612
HDAC11
Histone deacetylase 11.
    
   0.543
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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