STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC47Coiled-coil domain containing 47. (482 aa)    
Predicted Functional Partners:
TMCO1
Transmembrane and coiled-coil domains 1.
    
 
 0.954
ENSPCAP00000011005
annotation not available
    
 
 0.953
ENSPCAP00000003857
annotation not available
    
   0.873
ENSPCAP00000011047
annotation not available
   
   0.864
RPL38
Ribosomal protein L38.
    
 
 0.862
RPL3
Ribosomal protein L3.
   
   0.857
RPL13A
Ribosomal protein L13a.
   
   0.853
RPL11
Ribosomal protein L11.
   
   0.853
ENSPCAP00000002665
annotation not available
   
   0.851
RPL30
Ribosomal protein L30.
   
   0.848
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.