Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SQSTM1Sequestosome 1. (438 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor associated factor 6.
    
 0.997
ENSPCAP00000012454
annotation not available
   
 0.997
TBK1
TANK binding kinase 1.
    
 0.996
WDFY3
WD repeat and FYVE domain containing 3.
   
 0.995
ENSPCAP00000002978
annotation not available
    
 0.994
ENSPCAP00000010772
annotation not available
    
 0.994
ULK1
Unc-51 like autophagy activating kinase 1.
    
 
 0.993
UBC
Ubiquitin C.
   
 0.993
CYLD
CYLD lysine 63 deubiquitinase.
    
 0.991
ENSPCAP00000000913
annotation not available
   
 0.991
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.