Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OLFM4Olfactomedin 4. (503 aa)    
Predicted Functional Partners:
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.918
CHGA
Chromogranin A.
      
 0.819
LRIG1
Leucine rich repeats and immunoglobulin like domains 1.
    
 0.789
AXIN2
Axin 2.
      
 0.681
PCGF2
Polycomb group ring finger 2.
      
 0.650
SMOC2
SPARC related modular calcium binding 2.
      
 0.631
NOG
Noggin.
      
 0.621
ENSPCAP00000014262
annotation not available
    
 0.599
ENSPCAP00000012833
annotation not available
   
  
 0.597
NOD2
Nucleotide binding oligomerization domain containing 2.
    
 
 0.596
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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