STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFIBNuclear factor I B. (569 aa)    
Predicted Functional Partners:
ENSPCAP00000002072
annotation not available
  
 
0.672
NFIX
Nuclear factor I X.
  
  
0.631
NFIA
Nuclear factor I A.
   
  
0.624
GRM4
Glutamate metabotropic receptor 4.
      
 0.586
ENSPCAP00000009293
annotation not available
    
 
 0.580
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
   
  
 0.501
TLE3
TLE family member 3, transcriptional corepressor.
      
 0.426
SEMA6A
Semaphorin 6A.
      
 0.422
HSD17B4
Hydroxysteroid 17-beta dehydrogenase 4.
      
 0.422
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.