Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NFIBNuclear factor I B. (569 aa)    
Predicted Functional Partners:
ENSPCAP00000002072
annotation not available
   
 
 0.981
NFIX
Nuclear factor I X.
   
 
 0.905
NFIA
Nuclear factor I A.
   
 
 0.905
NF1
Neurofibromin 1.
      
 0.850
ENSPCAP00000009293
annotation not available
    
 
 0.795
ZFHX4
Zinc finger homeobox 4.
    
 
 0.680
GRM4
Glutamate metabotropic receptor 4.
      
 0.618
SOX2
SRY-box transcription factor 2.
    
 
 0.615
SOX3
SRY-box transcription factor 3.
    
 
 0.615
NFATC4
Nuclear factor of activated T cells 4.
    
 
 0.609
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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