Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DOK4Docking protein 4. (246 aa)    
Predicted Functional Partners:
PHKA2
Phosphorylase kinase regulatory subunit alpha 2.
    
   0.947
SEMA3E
Semaphorin 3E.
      
 0.903
COL5A2
Collagen type V alpha 2 chain.
      
 0.868
PHKB
Phosphorylase kinase regulatory subunit beta.
    
   0.835
HMG20A
High mobility group 20A.
    
   0.815
RCOR1
REST corepressor 1.
    
   0.797
GSE1
Gse1 coiled-coil protein.
    
   0.782
ENSPCAP00000007443
annotation not available
    
   0.773
NHLRC3
NHL repeat containing 3.
      
 0.769
RET
Ret proto-oncogene.
    
 0.750
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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