ENSPCAP00000002292 protein (Procavia capensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

ENSPCAP00000002292

annotation not available (145 aa)

Predicted Functional Partners:

MRPL20

0.993

MRPL52

0.984

MRPL41

0.983

MRPL47

0.982

MRPL40

0.980

ENSPCAP00000004187

0.979

MRPL3

0.978

MRPS12

0.977

MRPL15

0.973

MRPL19

0.971

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000002292	ENSPCAP00000004187	ENSPCAP00000002292	ENSPCAP00000004187	annotation not available	annotation not available	0.979
ENSPCAP00000002292	MRPL15	ENSPCAP00000002292	ENSPCAP00000013658	annotation not available	Mitochondrial ribosomal protein L15.	0.973
ENSPCAP00000002292	MRPL19	ENSPCAP00000002292	ENSPCAP00000001597	annotation not available	Mitochondrial ribosomal protein L19.	0.971
ENSPCAP00000002292	MRPL20	ENSPCAP00000002292	ENSPCAP00000001296	annotation not available	Mitochondrial ribosomal protein L20.	0.993
ENSPCAP00000002292	MRPL3	ENSPCAP00000002292	ENSPCAP00000008042	annotation not available	Mitochondrial ribosomal protein L3.	0.978
ENSPCAP00000002292	MRPL40	ENSPCAP00000002292	ENSPCAP00000007305	annotation not available	Mitochondrial ribosomal protein L40.	0.980
ENSPCAP00000002292	MRPL41	ENSPCAP00000002292	ENSPCAP00000002534	annotation not available	Mitochondrial ribosomal protein L41.	0.983
ENSPCAP00000002292	MRPL47	ENSPCAP00000002292	ENSPCAP00000015433	annotation not available	Mitochondrial ribosomal protein L47.	0.982
ENSPCAP00000002292	MRPL52	ENSPCAP00000002292	ENSPCAP00000000658	annotation not available	Mitochondrial ribosomal protein L52.	0.984
ENSPCAP00000002292	MRPS12	ENSPCAP00000002292	ENSPCAP00000010061	annotation not available	Mitochondrial ribosomal protein S12.	0.977
ENSPCAP00000004187	ENSPCAP00000002292	ENSPCAP00000004187	ENSPCAP00000002292	annotation not available	annotation not available	0.979
ENSPCAP00000004187	MRPL15	ENSPCAP00000004187	ENSPCAP00000013658	annotation not available	Mitochondrial ribosomal protein L15.	0.988
ENSPCAP00000004187	MRPL19	ENSPCAP00000004187	ENSPCAP00000001597	annotation not available	Mitochondrial ribosomal protein L19.	0.981
ENSPCAP00000004187	MRPL20	ENSPCAP00000004187	ENSPCAP00000001296	annotation not available	Mitochondrial ribosomal protein L20.	0.996
ENSPCAP00000004187	MRPL3	ENSPCAP00000004187	ENSPCAP00000008042	annotation not available	Mitochondrial ribosomal protein L3.	0.992
ENSPCAP00000004187	MRPL40	ENSPCAP00000004187	ENSPCAP00000007305	annotation not available	Mitochondrial ribosomal protein L40.	0.943
ENSPCAP00000004187	MRPL41	ENSPCAP00000004187	ENSPCAP00000002534	annotation not available	Mitochondrial ribosomal protein L41.	0.980
ENSPCAP00000004187	MRPL47	ENSPCAP00000004187	ENSPCAP00000015433	annotation not available	Mitochondrial ribosomal protein L47.	0.988
ENSPCAP00000004187	MRPL52	ENSPCAP00000004187	ENSPCAP00000000658	annotation not available	Mitochondrial ribosomal protein L52.	0.962
ENSPCAP00000004187	MRPS12	ENSPCAP00000004187	ENSPCAP00000010061	annotation not available	Mitochondrial ribosomal protein S12.	0.988