STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN2Matrilin 2. (903 aa)    
Predicted Functional Partners:
ENSPCAP00000014868
annotation not available
   
 0.829
LUM
Lumican.
   
 0.781
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
   
 0.669
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.665
FZD6
Frizzled class receptor 6.
    
 
 0.645
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.644
ENSPCAP00000003739
annotation not available
    
 0.639
ARID4A
AT-rich interaction domain 4A.
    
 0.635
TGFB1
Transforming growth factor beta 1.
    
 0.623
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.622
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.