STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBA4ATubulin alpha 4a. (448 aa)    
Predicted Functional Partners:
TUBB6
Tubulin beta 6 class V.
  
0.939
ENSPCAP00000010648
annotation not available
   
 0.932
ENSPCAP00000003757
annotation not available
  
0.929
MAPT
Microtubule associated protein tau.
    
 0.921
WDR90
WD repeat domain 90.
   
  0.904
TJP1
Tight junction protein 1.
    
 0.902
DCLK1
Doublecortin like kinase 1.
    
 
 0.895
ENSPCAP00000002776
annotation not available
  
0.883
ENSPCAP00000003559
annotation not available
  
0.883
NME8
NME/NM23 family member 8.
   
 
 0.882
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.