STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC2Transmembrane channel like 2. (902 aa)    
Predicted Functional Partners:
ENSPCAP00000007961
annotation not available
    
 0.903
CIB1
Calcium and integrin binding 1.
    
 0.901
CIB3
Calcium and integrin binding family member 3.
    
 0.832
ENSPCAP00000014868
annotation not available
   
 0.829
LHFPL5
LHFPL tetraspan subfamily member 5.
   
 
 0.805
TMIE
Transmembrane inner ear.
   
 
 0.712
USH1G
USH1 protein network component sans.
   
 0.660
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.644
ARID4A
AT-rich interaction domain 4A.
    
 0.635
ENSPCAP00000003739
annotation not available
    
 0.635
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.