STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIMS3Regulating synaptic membrane exocytosis 3. (308 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.977
UNC13B
Unc-13 homolog B.
    
 0.841
ENSPCAP00000008739
annotation not available
    
 0.841
ENSPCAP00000014549
annotation not available
    
 0.841
TSPOAP1
TSPO associated protein 1.
    
 0.790
ENSPCAP00000014878
annotation not available
    
 0.790
PPFIA3
PTPRF interacting protein alpha 3.
   
 0.727
SNAP25
Synaptosome associated protein 25.
   
 
 0.721
ENSPCAP00000009113
annotation not available
    
0.719
ERC2
ELKS/RAB6-interacting/CAST family member 2.
    
 
 0.691
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.