STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOP9NOP9 nucleolar protein. (636 aa)    
Predicted Functional Partners:
BYSL
Bystin like.
   
 
 0.964
UTP3
UTP3 small subunit processome component.
   
   0.954
ENSPCAP00000004822
annotation not available
   
 
 0.948
NOP58
NOP58 ribonucleoprotein.
   
   0.942
UTP4
UTP4 small subunit processome component.
   
 
 0.926
AATF
Apoptosis antagonizing transcription factor.
   
 
 0.926
DDX18
DEAD-box helicase 18.
   
 
 0.918
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.918
DDX56
DEAD-box helicase 56.
   
 
 0.917
BOP1
BOP1 ribosomal biogenesis factor.
   
   0.909
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.