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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RETREG1Reticulophagy regulator 1. (452 aa)    
Predicted Functional Partners:
NMD3
NMD3 ribosome export adaptor.
   
 
 0.962
LSG1
Large 60S subunit nuclear export GTPase 1.
   
 
 0.953
EIF6
Eukaryotic translation initiation factor 6.
   
 
 0.945
ENSPCAP00000005169
annotation not available
   
 
 0.944
RPL29
Ribosomal protein L29.
    
 
 0.901
RPL24
Ribosomal protein L24.
    
 
 0.897
ENSPCAP00000015903
annotation not available
   
 
 0.891
GNL2
G protein nucleolar 2.
   
 
 0.890
ENSPCAP00000002899
annotation not available
    
 
 0.886
RPL22L1
Ribosomal protein L22 like 1.
    
   0.882
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.