STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAPERS-phase cyclin A associated protein in the ER. (1392 aa)    
Predicted Functional Partners:
CCNA2
Cyclin A2.
    
 
 0.714
ENSPCAP00000007115
annotation not available
    
 
 0.635
ENSPCAP00000005323
annotation not available
      
 0.528
IARS2
isoleucyl-tRNA synthetase 2, mitochondrial.
      
 0.526
TSPAN3
Tetraspanin 3.
      
 0.499
TRIM44
Tripartite motif containing 44.
      
 0.495
NBAS
NBAS subunit of NRZ tethering complex.
      
 0.493
ZNF703
Zinc finger protein 703.
      
 0.493
IARS1
isoleucyl-tRNA synthetase 1.
      
 0.420
DNMBP
Dynamin binding protein.
      
 0.406
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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