Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NEDD9Neural precursor cell expressed, developmentally down-regulated 9. (819 aa)    
Predicted Functional Partners:
CRKL
CRK like proto-oncogene, adaptor protein.
    
 0.991
CRK
CRK proto-oncogene, adaptor protein.
    
 0.985
BCAR3
BCAR3 adaptor protein, NSP family member.
    
 0.964
BCAR1
BCAR1 scaffold protein, Cas family member.
    
   0.951
PTK2B
Protein tyrosine kinase 2 beta.
   
 0.947
PTK2
Protein tyrosine kinase 2.
   
 0.947
LUM
Lumican.
    
 0.922
VCL
Vinculin.
    
 0.918
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.908
MAP3K1
Mitogen-activated protein kinase kinase kinase 1.
    
 0.883
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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