STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP6TNF alpha induced protein 6. (274 aa)    
Predicted Functional Partners:
PTX3
Pentraxin 3.
   
 
 0.836
TNFSF11
TNF superfamily member 11.
    
 0.758
CD44
CD44 molecule (Indian blood group).
     
0.747
CHRD
Chordin.
    
 
 0.746
CXCL10
C-X-C motif chemokine ligand 10.
   
 
 0.733
CXCL9
C-X-C motif chemokine ligand 9.
   
 
 0.729
CXCL11
C-X-C motif chemokine ligand 11.
   
 
 0.729
MFRP
Membrane frizzled-related protein.
    
0.728
ENSPCAP00000007041
annotation not available
   
 0.712
COL22A1
Collagen type XXII alpha 1 chain.
    
 0.711
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.