STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CES5ACarboxylesterase 5A. (549 aa)    
Predicted Functional Partners:
NRXN1
Neurexin 1.
    
 0.764
NRXN3
Neurexin 3.
    
 0.764
NRXN2
Neurexin 2.
    
 0.764
CYB5R4
Cytochrome b5 reductase 4.
   
 0.714
UTP20
UTP20 small subunit processome component.
   
 0.710
WDR43
WD repeat domain 43.
   
 0.694
UTP4
UTP4 small subunit processome component.
    
 0.672
UTP15
UTP15 small subunit processome component.
   
 0.665
ENSPCAP00000002368
annotation not available
    
  0.663
FCF1
FCF1 rRNA-processing protein.
    
  0.663
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.