STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000002550annotation not available (230 aa)    
Predicted Functional Partners:
TNFRSF9
TNF receptor superfamily member 9.
    
 0.995
ENSPCAP00000010316
annotation not available
      
 0.590
CD27
CD27 molecule.
      
 0.584
ICOS
Inducible T cell costimulator.
    
 
 0.547
TNFSF4
TNF superfamily member 4.
      
 0.524
TNF
Tumor necrosis factor.
   
 
 0.519
CD40LG
CD40 ligand.
      
 0.497
ENSPCAP00000009977
annotation not available
  
   
 0.458
TNFSF18
TNF superfamily member 18.
      
 0.424
CABYR
Calcium binding tyrosine phosphorylation regulated.
  
 
   0.411
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.