STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNPO2LSynaptopodin 2 like. (959 aa)    
Predicted Functional Partners:
PTK2B
Protein tyrosine kinase 2 beta.
    
 0.775
PTK2
Protein tyrosine kinase 2.
    
 0.775
GIT2
GIT ArfGAP 2.
    
 0.756
GIT1
GIT ArfGAP 1.
    
 0.756
CTNNA3
Catenin alpha 3.
   
 0.685
CTNNA2
Catenin alpha 2.
   
 0.685
ENSPCAP00000014575
annotation not available
   
 0.685
CTNNAL1
Catenin alpha like 1.
   
 0.684
VCL
Vinculin.
   
 0.684
CRKL
CRK like proto-oncogene, adaptor protein.
    
 0.659
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.